FACSPy.dt.FlowJoWorkspace

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FACSPy.dt.FlowJoWorkspace#

class FACSPy.dt.FlowJoWorkspace(file, ignore_transforms=False)#

FlowJoWorkspace class to represent and unify cytometry FlowJo Workspace representations. This class is the intermediate representation of a workspace for FACSPy.

Parameters:

file (str) – The path or filename pointing to the table. Can be .txt, .csv.

Return type:

The object of FlowJoWorkspace

Examples

>>> import FACSPy as fp
>>> workspace = fp.dt.FlowJoWorkspace("workspace.wsp")
>>> workspace
FlowJoWorkspace(3 groups: ['All Samples', 'Compensation', 'group1'], 99 entries.)

Methods

add_external_compensation(matrix)

adds a compensation matrix to the samples.
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