FACSPy.dt.DivaWorkspace

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FACSPy.dt.DivaWorkspace#

class FACSPy.dt.DivaWorkspace(file)#

Class to represent a diva workspace. Currently experimental!

Built to be compatible with the flowkit package. Q1-Q4 Quadrant Gates are parsed as Polygon-Gates in contrast to GMLRectangle in Flowkit Quadrant Gates have an upper limit here in contrast to FlowKit were “None” is passed to extend the gates to infinity Binner-Regions are ignored as they define the points where the quadrant gates lie Code is inspired by CytoML, however one notable change: “restore to logicle scale” was removed

Parameters:

file (str) – The path or filename pointing to the table. Can be .txt, .csv.

Return type:

The object of DivaWorkspace

Examples

>>> import FACSPy as fp
>>> workspace = fp.dt.DivaWorkspace("workspace.xml")
>>> workspace
DivaWorkspace(3 groups: ['All Samples', 'Compensation', 'group1'], 99 entries.)

Methods

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