Utils

Utils#

Additional functionality is available through the following top-level utility functions.

subset_gate

Subsets the dataset to a specific population.

subset_fluo_channels

Subsets only channels that are of type 'fluo'.

remove_unnamed_channels

Removes unnamed channels.

remove_channel

Removes a channel from the dataset.

equalize_groups

Equalizes the cell count between groups.

convert_gate_to_obs

Converts the gate information stored in .obsm["gating"] into an .obs column.

rename_channel

Renames a channel name.

convert_cluster_to_gate

Converts cluster information to gates.